INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OP434448 | Gordonia phage Hollow | 75413 | 59.377 | Gordonia | Group I | Demosthenesvirus | Demosthenesvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | Complete | High-quality | 100.000 | DTR (high-confidence) | Demosthenesvirus | Demosthenesvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP434449 | Microbacterium phage OscarSo | 33432 | 69.221 | Microbacterium | Group I | Oscarsovirus | Oscarsovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium radiodurans NRRL B-24799 | High-quality | High-quality | 98.640 | AAI-based (high-confidence) | Oscarsovirus | Oscarsovirus oscarso | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP434450 | Gordonia phage Minos | 73144 | 59.030 | Gordonia | Group I | Woesvirus | Woesvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | Complete | High-quality | 100.000 | DTR (high-confidence) | Woesvirus | Woesvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP434451 | Arthrobacter phage BenitoAntonio | 57990 | 45.072 | Arthrobacter | Group I | Mudcatvirus | Mudcatvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter sp. ATCC 21022 | High-quality | High-quality | 99.560 | AAI-based (high-confidence) | Mudcatvirus | Mudcatvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP434452 | Arthrobacter phage Pureglobe5 | 69944 | 65.644 | Arthrobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter globiformis B-2979 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP434453 | Streptomyces phage RickRoss | 18373 | 54.368 | Streptomyces | Group I | Tectiviridae | Unclassified | Unclassified | Tectiviridae | Kalamavirales | Tectiliviricetes | Preplasmiviricota | Bamfordvirae | Varidnaviria | Streptomyces scabiei RL-34 | Complete | High-quality | 100.000 | ITR (high-confidence) | Deltatectivirus | Deltatectivirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP434454 | Mycobacterium phage Dynamo | 46673 | 67.202 | Mycobacterium | Group I | Fishburnevirus | Fishburnevirus | Pclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 95.260 | AAI-based (high-confidence) | Fishburnevirus | Fishburnevirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_30;immunity orf_31;antirepressor orf_34 |
| OP434455 | Arthrobacter phage VResidence | 42157 | 64.957 | Arthrobacter | Group I | Manhattanvirus | Manhattanvirus | Unclassified | Casidaviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter globiformis B-2979 | High-quality | High-quality | 97.100 | AAI-based (high-confidence) | Manhattanvirus | Manhattanvirus vresidence | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OP434456 | Gordonia phage Shivanishola | 57573 | 67.410 | Gordonia | Group I | Vividuovirus | Vividuovirus | Schenleyvirinae | Stackebrandtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 97.660 | AAI-based (high-confidence) | Vividuovirus | Vividuovirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP434457 | Gordonia phage OneDirection | 40444 | 65.577 | Gordonia | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 90.920 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | temperate | integrase orf_30 |