INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KC310805 | Synechococcus phage S-CBP42 | 45218 | 54.551 | Synechococcus | Group I | Aegirvirus | Aegirvirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. WH7803 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Aegirvirus | Aegirvirus SCBP42 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_49 |
| KC310806 | Synechococcus phage S-CBP2 | 46237 | 55.034 | Synechococcus | Group I | Kembevirus | Kembevirus | Unclassified | Unclassified | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Synechococcus sp. CB0208 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Kembevirus | Kembevirus SCBP2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_12 |
| KC311669 | Acinetobacter phage AB3 | 31185 | 39.176 | Acinetobacter | Group I | Friunavirus | Friunavirus | Beijerinckvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | carbapenem-resistant Acinetobacter baumannii | Medium-quality | Genome-fragment | 75.280 | AAI-based (high-confidence) | Friunavirus | Friunavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC330679 | Bacillus phage Curly | 49425 | 41.821 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus curly | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC330680 | Bacillus phage Eoghan | 49458 | 42.208 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus eoghan | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC330681 | Bacillus phage Gemini | 49362 | 41.901 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus andromeda | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC330682 | Bacillus phage Taylor | 49492 | 42.294 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus taylor | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC330683 | Bacillus phage Finn | 50161 | 41.690 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus finn | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC330684 | Bacillus phage Andromeda | 49259 | 41.907 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus andromeda | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KC333879 | Enterobacteria phage phiJLA23 | 43017 | 44.190 | Enterobacteria | Group I | Rogunavirus | Rogunavirus | Rogunavirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | High-quality | High-quality | 92.990 | AAI-based (high-confidence) | Rogunavirus | Rogunavirus JLA23 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |