INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_070913 | Yersinia phage vB_YenM_42.18 | 36481 | 46.367 | Yersinia | Group I | Firavirus | Firavirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_070914 | Yersinia phage vB_YenM_201.16 | 30280 | 51.255 | Yersinia | Group I | Duonihilunusvirus | Duonihilunusvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica | High-quality | High-quality | 96.930 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_070915 | Yersinia phage vB_YenM_56.17 | 33247 | 49.701 | Yersinia | Group I | Duonihilunusvirus | Duonihilunusvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_2;cro orf_3 | |||
| NC_070916 | Yersinia phage vB_YenM_06.16-2 | 29546 | 50.609 | Yersinia | Group I | Duonihilunusvirus | Duonihilunusvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica | High-quality | High-quality | 94.790 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_070917 | Yersinia phage vB_YenM_324 | 29180 | 49.575 | Yersinia | Group I | Tresduoquattuorvirus | Tresduoquattuorvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica 324 | High-quality | High-quality | 97.850 | AAI-based (high-confidence) | temperate | integrase orf_1 | |||
| NC_070918 | Yersinia phage vB_YenM_31.17 | 32949 | 48.973 | Yersinia | Group I | Graikaemvirus | Graikaemvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Yersinia enterocolitica | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_2 | |||
| NC_070919 | Aeromonas phage vB_AsaM_LPM4 | 37312 | 58.134 | Aeromonas | Group I | Piscesmortuivirus | Piscesmortuivirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas salmonicida | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_52 | |||
| NC_070920 | Shewanella phage vB_SspM_M16-3 | 40166 | 46.798 | Shewanella | Group I | Arsenicumvirus | Arsenicumvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shewanella sp. M16 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_61 | |||
| NC_070921 | Erwinia phage Pavtok | 61401 | 61.983 | Erwinia | Group I | Pavtokvirus | Pavtokvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_32 | |||
| NC_070922 | Streptococcus phage IPP65 | 39046 | 38.514 | Streptococcus | Group I | Paclarkvirus | Paclarkvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 24B/2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;antirepressor orf_6 |