Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
JX570712Propionibacterium phage PHL114L002946454.205PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Propionibacterium acnesHigh-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus PHL114L00Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX570713Propionibacterium phage PHL113M012920054.096PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Propionibacterium acnesHigh-qualityHigh-quality99.120AAI-based (high-confidence) PahexavirusPahexavirus PHL113M01Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX570714Propionibacterium phage PHL112N002926654.483PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Propionibacterium acnesHigh-qualityHigh-quality99.350AAI-based (high-confidence) PahexavirusPahexavirus PHL112N00Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX625144Enterobacteria phage M340547.959EnterobacteriaGroup IV EmpivirusEmpivirusUnclassifiedFiersviridaeNorziviralesLeviviricetesLenarviricotaOrthornaviraeRiboviria Escherichia coli J53 (plasmid RIP69)High-qualityHigh-quality93.360AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
JX649096Mycobacterium phage Serpentine6888466.515MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.150AAI-based (high-confidence) PegunavirusPegunavirus Pg1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX649097Mycobacterium phage Piglet6899266.544MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.300AAI-based (high-confidence) PegunavirusPegunavirus Pg1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX649098Mycobacterium phage Nacho6932166.561MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.780AAI-based (high-confidence) PegunavirusPegunavirus Pg1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX649099Mycobacterium phage Gyarad6800466.486MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.880AAI-based (high-confidence) PegunavirusPegunavirus sotoCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX649100Mycobacterium phage Alex6891066.523MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.190AAI-based (high-confidence) PegunavirusPegunavirus Pg1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX658790Acinetobacter phage Abp14218539.151AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality100.000AAI-based (high-confidence) FriunavirusFriunavirus Abp1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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