INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_042350 | Salinibacter phage M8CR30-2 | 35099 | 64.592 | Salinibacter | Group I | Holosalinivirus | Holosalinivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salinibacter ruber M8 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_042351 | Salinibacter phage M8CRM-1 | 53197 | 53.381 | Salinibacter | Group I | Kryptosalinivirus | Kryptosalinivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salinibacter ruber M8 | High-quality | High-quality | 98.860 | AAI-based (high-confidence) | temperate | integrase orf_5;integrase orf_14 | |||
| NC_042352 | Salinibacter phage M31CR41-2 | 51889 | 59.658 | Salinibacter | Group I | Kairosalinivirus | Kairosalinivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salinibacter ruber M31 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_042353 | Salinibacter phage SRUTV-1 | 50672 | 59.445 | Salinibacter | Group I | Kairosalinivirus | Kairosalinivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 94.160 | AAI-based (high-confidence) | lytic | ||||
| NC_042354 | Corynebacterium phage phi673 | 44530 | 51.087 | Corynebacterium | Group I | Ikedavirus | Ikedavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Corynebacterium glutamicum ATCC13032 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_042355 | Corynebacterium phage phi674 | 43193 | 50.749 | Corynebacterium | Group I | Ikedavirus | Ikedavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Corynebacterium glutamicum ATCC13032 | High-quality | High-quality | 98.600 | AAI-based (high-confidence) | lytic | ||||
| NC_043027 | Bacillus phage PBS1 | 252197 | 27.710 | Bacillus | Group I | Takahashivirus | Takahashivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus subtilis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | immunity orf_137 | |||
| NC_043028 | Xanthomonas phage Xf109 | 7190 | 59.597 | Xanthomonas | Group II | Xylivirus | Xylivirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Xanthomonas oryzae ATCC 35933 | High-quality | High-quality | 95.290 | AAI-based (high-confidence) | lytic | ||||
| NC_043029 | Stenotrophomonas phage SMA6 | 7648 | 62.631 | Stenotrophomonas | Group II | Scuticavirus | Scuticavirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Stenotrophomonas maltophilia str. Khak84 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_043427 | Alphaspiravirus yamagawaense | 24893 | 46.668 | Unspecified | Unclassified | Alphaspiravirus | Alphaspiravirus | Unclassified | Spiraviridae | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Aeropyrum pernix | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_28;integrase orf_32 |