INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| JQ729990 | Clostridium phage phiCP7R | 18397 | 34.810 | Clostridium | Group I | Brucesealvirus | Brucesealvirus | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens | Complete | High-quality | 100.000 | ITR (high-confidence) | Brucesealvirus | Brucesealvirus CP7R | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ729991 | Clostridium phage phiCPV4 | 17972 | 34.487 | Clostridium | Group I | Brucesealvirus | Brucesealvirus | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens | High-quality | High-quality | 98.980 | AAI-based (high-confidence) | Brucesealvirus | Brucesealvirus CPV4 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ729992 | Clostridium phage phiZP2 | 18078 | 34.478 | Clostridium | Group I | Brucesealvirus | Brucesealvirus | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens | Complete | High-quality | 100.000 | ITR (high-confidence) | Brucesealvirus | Brucesealvirus ZP2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740787 | Lactococcus phage ASCC191 | 32414 | 34.112 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC191 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740788 | Lactococcus phage ASCC273 | 32582 | 34.528 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC273 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740789 | Lactococcus phage ASCC281 | 32023 | 34.766 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC281 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740790 | Lactococcus phage ASCC284 | 33178 | 34.659 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC281 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740791 | Lactococcus phage ASCC287 | 32581 | 34.523 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC273 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740792 | Lactococcus phage ASCC310 | 32546 | 34.754 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC532 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| JQ740793 | Lactococcus phage ASCC324 | 32277 | 34.517 | Lactococcus | Group I | Skunavirus | Skunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactococcus lactis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Skunavirus | Skunavirus ASCC273 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |