INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_024368 | Mycobacterium phage Pinto | 50610 | 63.533 | Mycobacterium | Group I | Fromanvirus | Fromanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 97.460 | AAI-based (high-confidence) | temperate | integrase orf_36;immunity orf_67 | |||
| NC_024369 | Vibrio phage X29 | 41569 | 46.068 | Vibrio | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio cholerae | High-quality | High-quality | 95.310 | AAI-based (high-confidence) | temperate | integrase orf_35;cro orf_41;antirepressor orf_42;integrase orf_45 | |||
| NC_024370 | Streptococcus phage IC1 | 39965 | 41.121 | Streptococcus | Group I | Hinxtonvirus | Hinxtonvirus | Ferrettivirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae isolate 9908+13028 | High-quality | High-quality | 96.700 | AAI-based (high-confidence) | temperate | cro orf_45;integrase orf_65 | |||
| NC_024371 | Mycobacterium phage Damien | 68386 | 57.604 | Mycobacterium | Group I | Konstantinevirus | Konstantinevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 98.420 | AAI-based (high-confidence) | lytic | ||||
| NC_024375 | Listeria phage LP-026 | 67150 | 36.258 | Listeria | Group I | Homburgvirus | Homburgvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_024378 | Leuconostoc phage phiLNTR3 | 28015 | 36.052 | Leuconostoc | Group I | Unaquatrovirus | Unaquatrovirus | Mccleskeyvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Leuconostoc mesenteroides LN05 | High-quality | High-quality | 97.300 | AAI-based (high-confidence) | lytic | ||||
| NC_024379 | Escherichia phage PE3-1 | 39093 | 49.927 | Escherichia | Group I | Kayfunavirus | Kayfunavirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O153 | High-quality | High-quality | 98.280 | AAI-based (high-confidence) | lytic | ||||
| NC_024380 | Leuconostoc phage phiLN6B | 25740 | 36.465 | Leuconostoc | Group I | Limdunavirus | Limdunavirus | Mccleskeyvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Leuconostoc pseudomesenteroides LN02 | High-quality | High-quality | 95.900 | AAI-based (high-confidence) | lytic | ||||
| NC_024381 | Pseudomonas phage vB_PaeS_SCH_Ab26 | 43056 | 53.426 | Pseudomonas | Group I | Septimatrevirus | Septimatrevirus | Jondennisvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_024383 | Listeria phage LP-083-2 | 135831 | 35.868 | Listeria | Group I | Pecentumvirus | Pecentumvirus | Jasinskavirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic |