INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_012743 | Burkholderia phage BcepIL02 | 62715 | 66.203 | Burkholderia | Group I | Lessievirus | Lessievirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Burkholderia cenocepacia | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_4 | |||
| NC_012749 | Escherichia phage wV8 | 88487 | 38.894 | Escherichia | Group I | Felixounavirus | Felixounavirus | Ounavirinae | Andersonviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli O157:H7 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_012753 | Streptococcus phage 5093 | 37184 | 38.030 | Streptococcus | Group I | Vansinderenvirus | Vansinderenvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus CSK939 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_8;integrase orf_47;cro orf_48;cro orf_49;cro orf_50;antirepressor orf_52;cro orf_53 | |||
| NC_012756 | Streptococcus phage PH10 | 31276 | 39.490 | Streptococcus | Group I | Phadecavirus | Phadecavirus | Mcshanvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus oralis | High-quality | High-quality | 97.610 | AAI-based (high-confidence) | temperate | integrase orf_2;cro orf_5;integrase orf_28 | |||
| NC_012757 | Vibrio phage VEJ | 6842 | 42.955 | Vibrio | Group II | Fibrovirus | Fibrovirus | Unclassified | Inoviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Vibrio cholerae | High-quality | High-quality | 96.590 | AAI-based (high-confidence) | lytic | ||||
| NC_012784 | Staphylococcus phage phiPVL-CN125 | 44492 | 33.568 | Staphylococcus | Group I | Peeveelvirus | Peeveelvirus | Bronfenbrennervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus CN125 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_2;cro orf_5;cro orf_6;antirepressor orf_14 | |||
| NC_012788 | Mycobacterium phage Angel | 41441 | 66.690 | Mycobacterium | Group I | Liefievirus | Liefievirus | Gclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 96.310 | AAI-based (high-confidence) | temperate | integrase orf_32 | |||
| NC_012868 | Escherichia phage St-1 | 6094 | 45.208 | Escherichia | Group II | Alphatrevirus | Alphatrevirus | Unclassified | Eubullaviridae | Bullavirales | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Escherichia coli strain K12 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | unknown | ||||
| NC_012884 | Streptococcus phage M102 | 31147 | 39.211 | Streptococcus | Group I | Aliceevansviridae | Unclassified | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.650 | AAI-based (high-confidence) | lytic | ||||
| NC_013021 | Cyanophage PSS2 | 107530 | 52.301 | Prochlorococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Prochlorococcus marinus str. MIT 9313 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_106 |