INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_011055 | Mycobacterium phage Porky | 76312 | 62.841 | Mycobacterium | Group I | Kostyavirus | Kostyavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_48;immunity orf_51 | |||
| NC_011056 | Mycobacterium phage Kostya | 75811 | 62.917 | Mycobacterium | Group I | Kostyavirus | Kostyavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 99.590 | AAI-based (high-confidence) | temperate | integrase orf_53;immunity orf_56 | |||
| NC_011057 | Mycobacterium phage Phaedrus | 68090 | 67.566 | Mycobacterium | Group I | Pipefishvirus | Pipefishvirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium sp. | High-quality | High-quality | 97.550 | AAI-based (high-confidence) | lytic | ||||
| NC_011085 | Morganella phage MmP1 | 38457 | 46.519 | Morganella | Group I | Minipunavirus | Minipunavirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Morganella morganii | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_011103 | Rhizobium phage 16-3 | 60195 | 58.952 | Rhizobium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_011104 | Lactobacillus phage Lrm1 | 39989 | 45.490 | Lactobacillus | Group I | Larmunavirus | Larmunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus rhamnosus | High-quality | High-quality | 95.640 | AAI-based (high-confidence) | temperate | integrase orf_23;cro orf_25;cro orf_26;antirepressor orf_27 | |||
| NC_011105 | Pseudomonas phage PT5 | 42954 | 62.332 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.730 | AAI-based (high-confidence) | lytic | ||||
| NC_011107 | Pseudomonas phage PT2 | 42961 | 62.182 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.740 | AAI-based (high-confidence) | lytic | ||||
| NC_011142 | Iodobacter phage PhiPLPE | 47453 | 46.105 | Iodobacter | Group I | Iodovirus | Iodovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Iodobacter sp. CdM7 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | antirepressor orf_8 | |||
| NC_011165 | Pseudomonas phage LBL3 | 64427 | 55.469 | Pseudomonas | Group I | Pbunavirus | Pbunavirus | Unclassified | Lindbergviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 97.550 | AAI-based (high-confidence) | lytic |