Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
FJ792813Enterococcus phage EFAP-12111536.718EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecalisMedium-qualityGenome-fragment51.860AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
FJ822135Lactobacillus phage Lb338-114211137.398LactobacillusGroup I MooreparkvirusMooreparkvirusUnclassifiedHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) MooreparkvirusMooreparkvirus Lb3381Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_58
FJ839692Escherichia phage RB1416542935.325EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.480AAI-based (high-confidence) TequatrovirusTequatrovirus RB14Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ839693Enterobacteria phage RB5116839435.253EnterobacteriaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) TequatrovirusTequatrovirus RB51Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ848881Lactococcus phage SL42814434.967LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis SMQ-404High-qualityHigh-quality92.780AAI-based (high-confidence) SkunavirusSkunavirus Sl4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ848882Lactococcus phage CB133218234.700LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis SMQ-404High-qualityHigh-quality100.000AAI-based (high-confidence) SkunavirusSkunavirus CB13Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ848883Lactococcus phage CB142945934.804LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis SMQ-404High-qualityHigh-quality97.140AAI-based (high-confidence) SkunavirusSkunavirus CB14Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ848884Lactococcus phage CB192864335.146LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis SMQ-404High-qualityHigh-quality94.480AAI-based (high-confidence) SkunavirusSkunavirus CB19Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ848885Lactococcus phage CB202862535.025LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactis SMQ-404High-qualityHigh-quality94.420AAI-based (high-confidence) SkunavirusSkunavirus CB19Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
FJ849058Escherichia phage phiX174538644.727EscherichiaGroup II SinsheimervirusSinsheimervirusUnclassifiedEubullaviridaeBullaviralesMicroviricetesPhixviricotaSangerviraeFloreoviria Escherichia coli CHigh-qualityHigh-quality91.680AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingsunknown
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