INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession | Description | Genome Length (bp) | molGC (%) | Host ▲ | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PV524675 | Absconditicoccaceae phage RSA-ATP1 | 39071 | 42.272 | Absconditicoccaceae | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Absconditicoccaceae | Low-quality | Genome-fragment | 43.500 | HMM-based (lower-bound) | New_genus | New_species | No hits were found with the default settings | lytic | |
| FN436268 | Acaryochloris phage A-HIS1 | 55653 | 47.047 | Acaryochloris | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acaryochloris marina strain MBIC11017 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PP197248 | Acetoanaerobium phage ANDSL2_ph1 | 36061 | 31.727 | Acetoanaerobium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acetoanaerobium noterae DSL2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_56 |
| LC644971 | Acetobacter phage phiAO1 | 34100 | 61.364 | Acetobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acetobacter orleanensis NBRC 3170 | Medium-quality | Genome-fragment | 82.580 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| LC644972 | Acetobacter phage phiAP1 | 42805 | 52.391 | Acetobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acetobacter pasteurianus NBRC 109446 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_1 |
| LC644973 | Acetobacter phage phiAX1 | 50652 | 56.047 | Acetobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acetobacter sp. ATCC 21760 | Medium-quality | Genome-fragment | 78.210 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_6 |
| PZ836639 | Acetobacter phage Vinphasol_A2 | 56636 | 47.401 | Acetobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acetobacter fabarum | High-quality | High-quality | 95.470 | AAI-based (medium-confidence) | lytic | ||||
| NC_001341 | Acholeplasma phage MV-L51 | 4491 | 33.289 | Acholeplasma | Group II | Plectrovirus | Plectrovirus | Unclassified | Plectroviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Acholeplasma laidlawii | Not-determined | Genome-fragment | unknown | ||||||
| X58839 | Acholeplasma phage MV-L51 | 4491 | 33.289 | Acholeplasma | Group II | Plectrovirus | Plectrovirus | Unclassified | Plectroviridae | Tubulavirales | Faserviricetes | Hofneiviricota | Loebvirae | Floreoviria | Unspecified | Not-determined | Genome-fragment | New_genus | New_species | No hits were found with the default settings | unknown | |||
| KF787094 | Achromobacter phage JWDelta | 73659 | 54.251 | Achromobacter | Group I | Jwalphavirus | Jwalphavirus | Rothmandenesvirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Achromobacter xylosoxidans DSM 11852 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Jwalphavirus | Jwalphavirus jwalpha | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |